EGAF00005787910 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787910
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	106488675
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	235979	0.22160009033824488	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	184459	0.1732193587721887	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	122878	0.11539067417262916	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	121561	0.11415392294063195	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	119403	0.11212741636610654	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	118361	0.11114890855764709	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	117004	0.10987459464586258	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	109585	0.10290765661231112	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	108541	0.10192727066986232	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	107893	0.10131875525730787	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	30015	51.12617	6
CCGCGTT	33805	45.377285	7
AGACCGC	34015	44.176834	4
CTCGCTA	62835	44.17586	1
TCGACCG	55210	42.56767	145
CAGACCG	36020	42.112408	3
TCGCTAT	71930	38.22537	2
GCGTTCT	42580	37.230057	9
CGCTATG	77855	35.387775	3
ACCGCTA	19795	34.100765	2
GTGCTCT	88650	32.681328	145
CCGCTAA	23765	30.081387	3
GTCGCGT	7050	29.581385	1
CGATCCT	144395	27.7288	145
CGCTAAG	27320	25.850384	4
CCGGTAA	14560	25.207447	1
CGGTAAT	14395	23.102955	2
GCTATGT	128325	21.768312	4
CGCTAGA	40075	21.511816	1
CTATGTT	131675	21.366602	5