EGAF00005787914 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787914
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	119656864
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	258887	0.21635783468301495	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	205222	0.1715087569067496	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	178893	0.14950500457708804	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	177012	0.14793300950959237	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	159740	0.13349840089407658	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	159420	0.13323096951629954	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	157629	0.13173418952380367	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	153280	0.12809962995520258	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	137396	0.11482500494079471	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	132845	0.11102162931497185	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	127824	0.10682546385303897	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	125428	0.10482307141193338	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	120697	0.10086926563611094	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGACCGC	38060	45.06855	4
ACCGCGT	40370	43.27551	6
CTCGCTA	80830	42.486473	1
TCGACCG	103285	41.932144	145
CAGACCG	44510	39.487812	3
CCGCGTT	45020	38.82016	7
ACCGCTA	32930	37.52793	2
TCGCTAT	93925	36.94228	2
CGCTATG	101705	34.34873	3
CCGCTAA	40610	32.299225	3
GCGTTCT	58340	29.48779	9
CGCTAAG	46795	28.003557	4
GTGCTCT	97060	27.93779	145
CGATCCT	178470	26.62946	145
CTTCGAC	125655	26.27734	145
GCTATGT	135835	25.603752	4
GTCTCGC	74680	24.526134	4
CTATGTT	144825	24.349365	5
CACCGCT	56890	22.49472	1
CGTATCG	16820	21.483183	3