EGAF00005787920 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787920
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	127070989
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	214540	0.16883476054475346	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	203727	0.16032534381234728	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	168081	0.13227330748169433	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	164548	0.12949297183797004	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	154427	0.12152813259366385	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	154154	0.12131329205283826	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	153546	0.12083481934653077	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	146982	0.11566920282646105	No Hit
CTGGAGGCGACAGCGAGGGCTGTCTGCCGCGTCAGAGGACCCCGCCGGCC	140556	0.1106121870193361	No Hit
CCACACACGACCGGTCGGAGGCAGAACGGCAGCCCCTCGGCGGCCGGCCG	136544	0.10745489672705703	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGACCG	93325	43.112152	145
ACCGCTA	36935	43.053482	2
CTCGCTA	62820	40.212696	1
ACCGCGT	35505	38.16246	6
AGACCGC	35690	36.800713	4
CCGCTAA	46075	36.44862	3
TCGCTAT	71500	35.398193	2
CGCTATG	77040	32.717842	3
CCGCGTT	42285	32.043472	7
CAGACCG	43045	31.43567	3
CGCTAAG	53590	31.291252	4
CGATCCT	160310	25.758701	145
CTTCGAC	116535	24.853348	145
CACCGCT	68635	24.049662	1
AGAGTCG	70360	24.041494	9
CGTATCG	22040	24.031408	3
GTGCTCT	106090	23.38596	145
GCGTTCT	60370	21.907917	9
GTGTGCG	67985	20.911356	145
GTATCGA	22580	20.72379	4