EGAF00005787926 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787926
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	124674061
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	233185	0.187035697826511	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	209069	0.16769246010202554	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	199149	0.15973571278792306	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	170332	0.1366218430953332	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	167213	0.13412011982187697	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	140927	0.11303634362243162	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	136340	0.10935715008112232	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	127177	0.10200758600459803	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	126406	0.10138917348653621	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	44215	53.67732	6
CCGCGTT	48965	48.369705	7
AGACCGC	49705	47.418392	4
TCGACCG	77175	45.68128	145
CAGACCG	52485	45.53283	3
ACCGCTA	31640	40.304424	2
GTGCTCT	114000	40.248688	145
CTCGCTA	73680	38.079514	1
GCGTTCT	63525	37.26395	9
CCGCTAA	39180	34.479626	3
TCGCTAT	84395	33.181355	2
CGCTATG	92960	30.275932	3
CGCTAAG	46035	29.03486	4
CGATCCT	177150	27.243505	145
GTCGCGT	8535	26.3772	1
CGCGTTC	99035	23.772175	8
CACCGCT	57990	22.88461	1
CTTCGAC	99370	22.536497	145
TCAGACC	118295	21.539389	2
GCTATGT	135545	20.970682	4