EGAF00005787970 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787970
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	108205757
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	148065	0.13683652709901564	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	142873	0.132038261143536	No Hit
CCCCCGGGTGCCCGGGCCCCCCTCGCGGGGGACCGTGCCCCCGCCGCCGG	135927	0.12561900934716438	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	127610	0.11793272699898952	No Hit
CCCGGGTGCCCGGGCCCCCCTCGCGGGGGACCGTGCCCCCGCCGCCGGGG	126497	0.11690413108056717	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	114818	0.10611080517647503	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	111895	0.1034094701634036	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	34505	50.435795	6
TCGACCG	60120	50.291714	145
AGACCGC	38255	45.17221	4
CCGCGTT	38590	45.06345	7
CAGACCG	42585	41.147533	3
CTCGCTA	48325	34.39154	1
GCGTTCT	56065	34.240765	9
ACCGCTA	17730	34.165016	2
TCGCTAT	50460	32.845047	2
ATCGCGT	5890	31.977165	6
CGCTATG	53560	30.801298	3
CGCGTTC	69520	27.52223	8
CCGCTAA	23910	27.145912	3
CTTCGAC	82085	26.96948	145
TCGCGTC	24520	25.768476	9
AGTCGCC	49745	25.390465	7
GTCGCGT	5650	25.053782	1
CTCGCGT	25525	24.753891	8
CGATCCT	115120	23.534866	145
GAGTCGC	52550	23.308891	6