EGAF00005787980 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005787980
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	108791999
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	217580	0.19999632509739984	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	166098	0.15267483043491092	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	140632	0.12926685904539728	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	136502	0.12547062399322215	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	129140	0.11870358223677827	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	127899	0.11756287335064042	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	123981	0.1139615055699087	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	122424	0.1125303341470911	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	118491	0.10891517858771949	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	45680	63.369576	6
CCGCGTT	49995	57.96298	7
AGACCGC	50775	56.69046	4
CAGACCG	53625	54.09872	3
TCGACCG	59420	48.39947	145
GTGCTCT	108775	47.256878	145
GCGTTCT	64800	44.545364	9
CTCGCTA	64045	40.9252	1
TCGCTAT	70520	37.054348	2
CGCGTTC	79375	36.255203	8
CGCTATG	78340	33.363544	3
GACCGCG	91505	31.813366	5
ACCGCTA	22520	31.73159	2
CCGCTAA	26580	28.159306	3
CGATCCT	145345	27.30947	145
TCAGACC	115465	26.564777	2
CTCAGAC	140030	24.55258	1
CGCTAAG	31580	23.303566	4
CTTCGAC	78760	22.960756	145
GCTATGT	124540	21.203451	4