FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005787983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005787983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117076676
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGTGGC1592950.025.7854271
TGGCGCG1028800.025.680024
GTGGCGC1337500.021.1998923
GGCGCGT1146000.021.0629225
CAATCGC198100.020.3704411
TCAATCG144350.019.8744263
GGGGACC4184850.018.768822145
GGTGGCG1872500.018.0273932
GCGACAT300100.017.8420187
TGCGACA300050.017.5771666
CGTGCCT1552200.016.5705689
GCGTGCC1480350.016.1176788
AGGGCGA643250.015.5810474
ATATCGG205000.015.167185145
GCGCGTG1684050.014.4655396
CGCGTGC1653900.014.4600347
GGCGATC257100.014.1421992
GCCGTAT246800.013.504115145
CGGCCGC2107250.013.4917755145
AGTTACG275100.013.44461145
Produced by FastQC (version 0.11.5)