EGAF00005788048 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788048
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	115864685
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	295530	0.2550647766400953	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	221666	0.19131454938146167	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	185426	0.1600366841717129	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	175150	0.15116771775627752	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	158262	0.13659209447641446	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	146656	0.1265752373123873	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	145889	0.12591325821150767	No Hit
CTGGAGGCGACAGCGAGGGCTGTCTGCCGCGTCAGAGGACCCCGCCGGCC	144795	0.12496905334010962	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	140113	0.12092813267476625	No Hit
CCACACACGACCGGTCGGAGGCAGAACGGCAGCCCCTCGGCGGCCGGCCG	136769	0.11804200736402123	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	134542	0.11611993766694312	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	131933	0.11386817303305145	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	131597	0.11357817958077562	No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	126111	0.10884334601177227	No Hit
CACCGCTAAGAGTCGTACGAGGTCGATTTGGCGAGGGCGCTCCCGACGAC	126104	0.10883730448151652	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAACGA	119322	0.1029839247394493	No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT	118271	0.10207683212533655	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCTA	36470	48.860767	2
ACCGCGT	37345	46.541607	6
AGACCGC	38080	44.508686	4
TCGACCG	70570	42.610943	145
CCGCGTT	41855	41.659332	7
CTCGCTA	95380	41.636925	1
CAGACCG	42430	40.7755	3
CCGCTAA	48340	39.059086	3
TCGCTAT	108375	36.854584	2
GTGCTCT	91030	35.363102	145
CGCTATG	120380	33.29716	3
CGCTAAG	58070	32.609543	4
GCGTTCT	54865	31.105433	9
CACCGCT	60805	29.679998	1
CGATCCT	173215	28.366331	145
GCTATGT	157760	25.567596	4
GTCGCGT	10660	25.332355	1
GTCTCGC	79660	25.297874	4
CTATGTT	166685	24.317093	5
CGCTAGA	66955	24.039377	1