EGAF00005788068 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788068
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	121513475
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	386599	0.31815319247515556	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	260967	0.21476383586264816	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	240461	0.19788834119014373	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	233964	0.19254160906845927	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	219219	0.18040715237548757	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	215739	0.1775432724642267	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	196010	0.16130721304777104	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	192543	0.15845403153847754	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG	156068	0.12843678448007514	No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	148615	0.12230330833679144	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	140728	0.11581267015859764	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	27510	52.878445	6
TCGACCG	46430	52.610355	145
CTCGCTA	94270	47.366272	1
CCGCGTT	30830	47.145283	7
TCGCTAT	105330	42.288036	2
AGACCGC	36470	39.70613	4
CAGACCG	37285	39.48724	3
CGCTATG	117635	37.932053	3
CGCGTTC	44290	32.747517	8
CGATCCT	226530	32.20424	145
GCGTTCT	45900	31.625887	9
GCTATGT	168175	26.78721	4
ACCGCTA	15365	25.248444	2
GACCGCG	59075	24.76169	5
CTATGTT	194580	23.292799	5
ATGTTGC	206660	22.210386	7
GTCTCGC	78175	22.087053	4
TATGTTG	209655	21.77409	6
GTGCTCT	101140	20.982895	145
CCGCTAA	20075	20.768583	3