EGAF00005788070 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788070
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	106413490
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	264679	0.24872692362594256	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	209610	0.1969769058415432	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	180293	0.1694268273693495	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	146648	0.13780959538118712	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	142888	0.1342762087776653	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	138610	0.13025604178567962	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	136339	0.12812191386637165	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	134246	0.12615505797244317	No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	133814	0.12574909440523002	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	133419	0.1253779008657643	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	132323	0.12434795626005687	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	127013	0.119357987413062	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAAAAGAACGA	121746	0.11440842697669253	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	120358	0.11310408107092437	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	62525	64.762886	6
GTGCTCT	113140	63.226486	145
AGACCGC	65725	61.22977	4
CCGCGTT	66295	61.04234	7
CAGACCG	68275	59.364594	3
GCGTTCT	79970	50.447865	9
CTCGCTA	88875	40.428574	1
TCGACCG	65600	40.04512	145
CGCGTTC	108790	36.98596	8
ACCGCTA	18510	36.191338	2
TCGCTAT	100805	35.735928	2
GACCGCG	121165	33.574287	5
CGCTATG	111120	32.57592	3
TCAGACC	135535	30.973305	2
CTCAGAC	157970	28.50991	1
CGATCCT	182460	27.379871	145
CCGCTAA	27255	26.52608	3
GTCTCGC	76340	24.836796	4
GTCGCGT	7060	24.128275	1
GCTATGT	153125	23.879875	4