EGAF00005788072 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788072
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	114459589
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	190491	0.16642642321562068	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	184188	0.16091967620117875	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	137523	0.12014982860020579	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	136410	0.11917743300650853	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	128030	0.11185607175297477	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	122279	0.10683159101680857	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	116043	0.10138337994556315	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	43340	55.924683	6
AGACCGC	47375	50.848614	4
CCGCGTT	48315	50.127533	7
TCGACCG	60615	48.332603	145
CAGACCG	51900	47.08818	3
CTCGCTA	59625	40.408707	1
GCGTTCT	62350	38.72423	9
TCGCTAT	63690	37.68745	2
CGCTATG	68930	34.78637	3
CGCGTTC	88465	27.215525	8
ACCGCTA	21790	26.818022	2
CGATCCT	133260	26.20915	145
CCGCTAA	24805	25.2142	3
GTCGCGT	6785	25.096893	1
GACCGCG	101260	24.077288	5
GTGCTCT	102285	23.938437	145
TCAGACC	109940	23.440554	2
GCGCTCT	40825	23.284454	145
CGCTAAG	27110	22.478394	4
CTCAGAC	135595	21.822153	1