EGAF00005788106 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788106
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	121505963
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	223890	0.1842625616653892	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	181791	0.14961487939484913	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	171475	0.14112476109505837	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	157586	0.12969404637367468	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	137182	0.11290145488579849	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	129753	0.10678735166273279	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	128540	0.10578904674826534	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	125294	0.10311757292109196	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	124856	0.10275709678544748	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGACCG	69420	54.39822	145
ACCGCGT	29710	50.649925	6
CCGCGTT	33410	45.02229	7
CTCGCTA	61285	42.766582	1
AGACCGC	35220	42.708553	4
TCGCTAT	68395	38.38411	2
CAGACCG	43315	35.33638	3
CGCTATG	76315	34.400593	3
GCGTTCT	47885	31.675056	9
CGCGTTC	49535	30.324015	8
GACCGCG	52105	29.033504	5
CGATCCT	145520	28.46617	145
ACCGCTA	16100	28.333555	2
GTGCTCT	103495	26.207644	145
CTTCGAC	88055	25.235624	145
CCGCTAA	23615	21.552849	3
GCTATGT	125210	21.226906	4
GAGTCTT	137260	18.562746	4
CGCTAAG	27645	17.700268	4
TCGTACG	16640	17.56637	10-14