EGAF00005788122 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788122
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	171451685
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	404668	0.23602451034529054	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	297785	0.17368449893041296	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	273665	0.15961639572104527	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	245167	0.14299480346314475	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	237177	0.13833459846136828	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	225173	0.13133320911952542	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	215807	0.12587044565937044	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	204992	0.11956254614820497	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	173317	0.10108795372877205	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGACCG	77055	56.13147	145
ACCGCGT	32820	45.36475	6
CTCGCTA	93860	43.769398	1
TCGCTAT	101680	40.162426	2
ACCGCTA	23675	38.33125	2
CCGCGTT	40025	37.167446	7
CGCTATG	111090	36.786232	3
AGACCGC	41785	35.04472	4
CAGACCG	46730	32.188786	3
CGATCCT	249480	28.815178	145
CCGCTAA	34510	28.029295	3
CGCTAAG	40020	23.79715	4
GCGTTCT	64740	22.861044	9
TCGCGTC	78260	22.78139	9
CTCGCGT	78520	22.641401	8
GTCGCGT	10300	22.327389	1
GCTATGT	190470	21.74678	4
CGCTAGA	50270	21.7173	1
CTTCGAC	115325	21.070845	145
TTCGCGG	84680	20.111494	8