EGAF00005788124 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788124
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	118873302
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	205453	0.17283359387122937	No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	203825	0.1714640685256644	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	151204	0.12719761078059394	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	146477	0.12322110813410397	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	134122	0.11282768943357861	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	132677	0.11161210950462198	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	124621	0.1048351462467157	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	49640	53.701668	6
AGACCGC	53115	49.7726	4
CCGCGTT	55635	47.870228	7
CAGACCG	57625	46.519466	3
TCGACCG	41355	41.909832	145
GCGTTCT	66955	39.73967	9
CTCGCTA	71080	37.826923	1
CGCTATG	78920	33.42231	3
CGCGTTC	82245	32.192753	8
GACCGCG	84715	31.511389	5
TCGCTAT	84500	31.377998	2
CGGCGTG	46640	27.331747	145
GCTATCG	32360	24.915667	145
GGTGCTC	120930	24.407803	145
TCAGACC	114890	24.244192	2
CGATCCT	162300	22.993023	145
CGGAGTA	40270	22.775118	4
CTTCGAC	60935	22.470716	145
GTGCTCT	115870	22.402262	145
CTCAGAC	143590	22.111277	1