EGAF00005788140 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788140
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	127010101
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	293335	0.23095407191275286	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	210132	0.16544510896814418	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	209101	0.16463336250712848	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	204828	0.16126906315900025	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	193820	0.15260203595932892	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	173783	0.13682612534888072	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	167018	0.13149977732873386	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	147010	0.11574669954793596	No Hit
GTCCAGAGTCGCCGCCGCCGCCGGCCCCCCGGGTGCCCGGGCCCCCCTCG	142312	0.11204778114458785	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	134627	0.10599708128725918	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	127908	0.10070695085897144	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	46415	61.382603	6
TCGACCG	75535	58.082134	145
CCGCGTT	49510	57.506145	7
AGACCGC	51790	54.786816	4
CAGACCG	55145	52.001617	3
CTCGCTA	72160	45.630585	1
GCGTTCT	65010	43.74508	9
TCGCTAT	78170	42.13248	2
CGCTATG	85580	38.54399	3
GTGCTCT	123340	36.809715	145
CGCGTTC	77505	36.591034	8
GACCGCG	87180	32.750565	5
TTCGGCG	57120	30.382736	7
ACCGCTA	14870	29.560963	2
CGATCCT	180935	28.630613	145
GGATTCG	64180	27.433033	4
TCGGCGA	63965	27.02898	8
ATTCGGC	65235	26.935156	6
CTTCGAC	99935	26.643288	145
CGGGATT	63335	26.28632	2