EGAF00005788152 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788152
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	132051155
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	357708	0.2708859305319973	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	232200	0.17584094588191979	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	232112	0.1757743050411032	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	226060	0.17119123267039957	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	216716	0.16411518702733044	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	213776	0.1618887771182312	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	204196	0.1546340128566085	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	191108	0.14472270234970683	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	170155	0.1288553666948237	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	162581	0.1231197106909061	No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	159626	0.12088194154757678	No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT	148670	0.11258515686591306	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG	144094	0.10911983314345111	No Hit
CCCCCGGGTGCCCGGGCCCCCCTCGCGGGGGACCGTGCCCCCGCCGCCGG	133811	0.1013326994375778	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGACCG	59075	44.89695	145
ACCGCGT	35015	43.22891	6
CTCGCTA	122040	42.558884	1
AGACCGC	37205	40.45108	4
CCGCGTT	37705	40.177692	7
TCGCTAT	135755	38.551044	2
CAGACCG	40945	37.28473	3
CGCTATG	147325	35.636654	3
GCGTTCT	50395	30.08513	9
CGATCCT	237590	28.40943	145
GTCTCGC	99520	28.34518	4
CGCGTTC	54940	27.415775	8
GCTATGT	196370	27.051317	4
CTTCGAC	80430	26.522799	145
GGGGTCT	143850	24.104269	1
TCTCGCT	119695	23.562323	5
CTATGTT	231610	23.103998	5
TATGTTG	234875	22.999233	6
GGTCTCG	134145	21.965736	3
GTCGGTT	21965	21.927404	1