EGAF00005788154 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788154
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	130552826
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	335459	0.2569526913189914	No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	296524	0.22712951460736666	No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT	224965	0.17231721969771838	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	202522	0.15512647730812046	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	201913	0.15465999947025275	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	192630	0.14754946782998019	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	180862	0.1385354921386382	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	179193	0.13725708243190385	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	173628	0.13299444012035405	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	157355	0.12052975398632887	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	155533	0.11913415034003172	No Hit
CTGGAGGCGACAGCGAGGGCTGTCTGCCGCGTCAGAGGACCCCGCCGGCC	153478	0.11756007487727611	No Hit
CACCGCTAAGAGTCGTACGAGGTCGATTTGGCGAGGGCGCTCCCGACGAC	143428	0.10986204159226702	No Hit
CCACACACGACCGGTCGGAGGCAGAACGGCAGCCCCTCGGCGGCCGGCCG	143408	0.10984672212304313	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	140583	0.10768284709516743	No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG	137161	0.10506168591095837	No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	130953	0.10030652266386023	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGCTCT	139805	59.320057	145
ACCGCGT	76540	58.288223	6
AGACCGC	76870	57.45616	4
CAGACCG	82630	53.886387	3
CCGCGTT	83535	53.46756	7
ACCGCTA	41365	49.31704	2
GCGTTCT	97835	45.13969	9
TCGACCG	103375	44.107906	145
CTCGCTA	90725	40.846184	1
CCGCTAA	54465	39.803207	3
TCGCTAT	100110	37.197945	2
CGCTATG	110185	33.957714	3
CGCTAAG	65315	33.29055	4
TCAGACC	144155	32.190895	2
CACCGCT	69445	29.89064	1
CTCAGAC	172600	29.507166	1
CGATCCT	195705	27.758718	145
CGCGTTC	164945	26.814827	8
CTTCGAC	130455	26.07748	145
GTCTCGC	77165	25.561783	4