FastQCFastQC Report
Tue 26 Apr 2022
EGAF00005788158

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788158
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117351413
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA3131070.2668114443581519No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT1916960.16335210211742401No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA1534090.13072616347619095No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1472850.12550764940512477No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)