EGAF00005788164 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005788164
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	132956090
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT	331081	0.24901529520009202	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT	300213	0.22579860764557683	No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT	298144	0.22424245478337998	No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA	250404	0.18833586336661975	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	215009	0.1617142922900335	No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG	190748	0.1434669145279468	No Hit
CTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC	171603	0.12906742368852753	No Hit
CTCGCTATGTTGCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC	159422	0.11990575234274714	No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT	148346	0.1115751824530941	No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC	145412	0.10936843885827269	No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA	143792	0.10814999147462895	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGCTA	88985	43.829006	1
TCGCTAT	94230	41.586987	2
TCGACCG	66735	39.726826	145
CGCTATG	100335	39.248947	3
ACCGCGT	27020	33.634613	6
ACCGCTA	21435	31.2266	2
CCGCGTT	30510	29.808962	7
CTTCGAC	101555	28.526155	145
GTCTCGC	89270	26.93299	4
AGACCGC	33035	26.832758	4
CCGCTAA	30135	24.172535	3
CAGACCG	38535	23.936241	3
CCGGTAA	17690	23.74356	1
GCTATGT	169690	23.489504	4
CGATCCT	229125	23.336744	145
GGGGTCT	163570	23.16737	1
CTATGTT	178940	22.509977	5
TCTCGCT	112435	21.484226	5
CGCTAAG	32865	21.033415	4
ATGTTGC	197750	20.574734	7