FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005788171

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788171
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48963102
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAG122350.018.6549221
CGGAGAA100800.018.0249961
ATGGGAG96500.017.9728741
TTGCTGC155900.017.661591
AAACGCT179300.017.6030331
GTGGTCG71200.017.3647735
CTGGACG93350.017.3179361
AGGCTGC110450.017.2273271
CCGGACA99600.017.12621
GTGCTGG105600.017.0493581
CGGGCAT120150.016.9814431
ATCGATG145050.016.8204121
GGCGTCA108450.016.7535231
CCGAGAG93750.016.6897893
TGGAGGA125300.016.6611481
TGGGCTG109350.016.5854421
GGCGGTG48700.016.5560914
CGGAACC95550.016.539121
CGCATGG119100.016.5305461
ACGCACG91200.016.4109121
Produced by FastQC (version 0.11.5)