FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005788175

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788175
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50551182
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAG123050.018.3885251
CGGAGAA100250.018.2453421
ATGGGAG103000.017.9825921
AAACGCT185850.017.8656221
TTGCTGC163600.017.7323991
CTGGACG102650.017.6364971
AGGCTGC110150.017.6246071
GTGGTCG72000.017.3554535
GTGCTGG107500.017.1786441
CCGGACA107950.016.9643041
CGGGCAT130400.016.8456731
TGGAGGA122000.016.787731
GGCGTCA112900.016.776151
TGGGCTG107200.016.5902141
AGGCGTG71050.016.5502194
ATCGATG144800.016.5004841
CGCATGG118550.016.4779131
CTGGCAG98600.016.4745981
GTGGAGA132100.016.3372961
AGCGACT83850.016.331438
Produced by FastQC (version 0.11.5)