FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005788205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103675709
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACTGC610900.019.9871317
GCACGTG409900.019.9571
CGCACTG616700.019.8259096
CTGCGTG404250.019.45153210
CACTGCG412650.019.1088818
GGAAGCG255650.019.0396465
ACTGCGT413700.019.0098659
GCTAGGT394150.018.8239965
CCGCACT652950.018.716545
TTGGGCG219100.018.6153891
GACCGTG290450.018.574241
ATCCGCA401350.018.284033
GGGCGCA180900.018.2784943
TTACGCC373000.018.2696911
AGGTGTA321800.018.2569374
ATCCGAA350650.018.1745289
AGGCTAG307550.018.1717593
CTATCCG457950.018.1634331
CCCTAAC449050.018.1214871
AGCGACT263900.018.1054348
Produced by FastQC (version 0.11.5)