FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005788231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42928933
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGACG152400.019.6032241
GGGATGA118800.018.8375151
CGGCGAG41400.018.8145663
CGAGAGG69500.018.7539656
GCGTGGT77650.018.7022443
CGGGAGC53200.018.6492164
AGGGAAG86800.018.56863
CGCGGTT111700.018.55193910
ACAAAGA152500.018.5004141
AGGCGTG52100.018.4307144
CTTCGGC152100.018.2957786
TTGGGCG69600.018.283161
GTCGCGG57500.018.268158
AGGGCCT116950.018.250731
GCGACGC62650.018.2344822
GGTGGAG54700.018.1777527
CCCGGAA99850.018.1240981
GTACGTG114500.018.0597388
TGGCGTG92900.018.0462461
GGAGGAT77350.017.988271
Produced by FastQC (version 0.11.5)