FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005788235

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788235
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42299852
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGACG150150.019.6303981
GGGATGA114400.019.0494751
CGGCGAG42950.018.87933
CGCGGTT110500.018.65408110
GCGTGGT74750.018.6339133
CGAGAGG69650.018.6032226
AGGGAAG82500.018.5504633
CTTCGGC149550.018.4167026
TCTACCG178750.018.3675421
ACAAAGA149500.018.3537561
AGGCGTG52450.018.245524
TGGCGTG89650.018.1577381
GGAGGAT75000.018.1091351
AGACGCA103750.018.0971168
CCCGGAA99100.018.0921961
GTACGTG109400.018.0874718
AGGGCCT119450.018.0782621
CGGGGTG33100.018.0781254
ACGCACG119600.018.0647931
GCGACGG51000.017.972152
Produced by FastQC (version 0.11.5)