FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005788307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62238270
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAG147350.018.5149421
ATGGGAG124000.018.3966711
CGGAGAA124850.018.033331
AGGCTGC139600.017.7920041
TTGCTGC195150.017.787981
AAACGCT226950.017.7550581
CTGGACG124000.017.2957121
GTGGTCG88850.017.232095
GTGCTGG133550.017.2048051
TGGGCTG129750.016.9959241
CCGGACA128350.016.8810861
CGGGCAT155300.016.8298591
GGCGGTG60100.016.7828884
CGCATGG144550.016.6648121
GGCGTCA141000.016.5534271
TGGAGGA155700.016.5532761
CTGGCAG124850.016.5342271
CCAGGCG72600.016.4683116
GGGATGA131050.016.4240761
CCGAGAG117600.016.3776153
Produced by FastQC (version 0.11.5)