FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005788321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38239796
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGGTG53150.019.6400874
GCCGATG96500.019.1267031
CGCGTGA97650.019.0479761
TGAGCGC116350.018.8149381
ATGGGAG48050.018.6222231
TGGGAAG87450.018.6141281
GGGCTAG70000.018.5150473
CGGGAAG44950.018.381793
GTGAGCG37050.018.2579738
CTCGAGG68850.018.0478041
GTGCTGG71900.017.9710561
ACGGGGT67800.017.8338683
ATCGTGA79550.017.7509171
CCGGGTA84450.017.698421
CGTGATC87000.017.6919653
TCCCGAG133450.017.5972588
GATGCCG72450.017.5959639
CCAGCGC80900.017.4846976
CCCGAGA58750.017.2619959
CGGGATC46250.017.175253
Produced by FastQC (version 0.11.5)