FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005788396

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788396
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75905399
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGTCG61150.014.44971594
AAGTCGG188600.013.23276894
CAAGTCG142900.05.887334394
Produced by FastQC (version 0.11.5)