FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005788419

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788419
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70375579
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGTCG88200.044.33559894
CAAGTCG218850.033.9748794
AAAGTCG157750.025.80158494
GAAGTCG330650.024.97474594
ATAAGTC165550.07.097553794
GCAAGTC368450.06.658705794
ACAAGTC327200.06.46393694
CGAAGTC217350.06.054750494
CTAAGTC189400.06.0052894
GGAAGTC606200.05.34196694
TTAAGTC195500.05.14475794
GTAAGTC249700.05.119743394
AGAAGTC629350.05.11559694
Produced by FastQC (version 0.11.5)