FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005788426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71731332
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGTCG125150.055.4686494
CAAGTCG278500.044.06355794
AAAGTCG190100.034.39084694
GAAGTCG368950.033.74522494
ATAAGTC202950.011.32446494
ACAAGTC378300.010.22495594
CTAAGTC216300.08.66990394
GCAAGTC406200.07.891186794
TTAAGTC230400.07.486545694
GTAAGTC291800.07.296436394
TCAAGTC439800.07.213506794
CGAAGTC216450.07.07877194
AGAAGTC684750.07.049142494
GGAAGTC636150.06.996620794
CCAAGTC630800.06.966551394
TGAAGTC660900.05.575427594
Produced by FastQC (version 0.11.5)