FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005788432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72361511
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG351250.057.16723694
TAAGTCG206400.036.47400794
AAAGTCG189100.021.1728294
CAAGTCG202700.021.16643194
GAAGTCG288750.019.22022894
CTAAGTC286850.09.07581394
ATAAGTC260200.07.982622694
TTAAGTC340100.07.000132692-93
Produced by FastQC (version 0.11.5)