FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005788475

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788475
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72154415
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG148550.020.18579794
TAAGTCG63900.015.88732494
CAAGTCG134800.07.147625494
AAAGTCG122250.06.420449794
GAAGTCG223950.05.267693594
Produced by FastQC (version 0.11.5)