FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005788488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005788488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62344009
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT1113810.17865549839760866No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG732780.11753815831766609No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)