EGAF00005790650 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005790650
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2935813
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	15339	0.5224787818570188	No Hit
AGAAAGAATAAGCATGTTACCTTAAGATCAACCACCATGGACTGAACAAG	6310	0.21493194559735243	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	6244	0.2126838460079031	No Hit
GCCACTTGATTTCTTTTCCTTTCTCTCTCTACCAATATTAAGCCTTAGTG	5893	0.20072804364583166	No Hit
AGATGTTTGGAGCTTTGGAGTGGTTCTGTATCNNN	4356	0.14837457290365563	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	4052	0.13801968994619207	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAATTGCCT	3112	0.10600130185403499	No Hit
TACTAGTCGAAAGCGGCCCCGTGAAGGGGAAGCCGAGGGTGCCGAGACCA	2948	0.10041511499540332	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCTAGCC	2255	107.11335	1
CGTGAGT	305	103.78773	145
TAGTCGA	495	97.824776	4
CGACGTA	330	95.8699	5
CGCAATC	270	95.65089	3
CGCACGT	385	90.58402	1
CGATACT	300	90.38701	7
GGACGTA	265	85.27512	5
TAATACG	400	83.93508	6
GCTAGTC	320	82.723076	3
GTTCCGT	275	82.17421	5
AAACGCG	325	81.44764	9
TAGCCCT	2975	80.51555	3
CGGTTTA	315	79.95996	1
GTTGCGA	340	79.75732	6
CGGGTTA	180	78.91333	5
CTAGCGT	385	78.4841	145
CGCTCGA	330	76.30072	9
CCTGACG	525	76.250015	2
CCTGTCA	3185	74.79885	7