EGAF00005790824 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005790824
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10908009
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTAGCCCTGTCATTCTAGGAGTTTATTATCCTTCAGACACAGCTACTTA	59056	0.5414003600473744	No Hit
CGGCGGCTGGTAAGGGAAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCC	31446	0.28828359052509034	No Hit
GCCACTTGATTTCTTTTCCTTTCTCTCTCTACCAATATTAAGCCTTAGTG	30360	0.2783276031400414	No Hit
AGAAAGAATAAGCATGTTACCTTAAGATCAACCACCATGGACTGAACAAG	24531	0.22488980344625678	No Hit
CTTTCGTGTTCAAACCACGGAGTTCACAACACAGCAGCACACACAGCCGG	24115	0.22107609188807964	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAACTGTCT	18146	0.16635483157375466	No Hit
TACTAGTCGAAAGCGGCCCCGTGAAGGGGAAGCCGAGGGTGCCGAGACCA	16862	0.15458366416822722	No Hit
CTGGGCTCATGTGACCTACTGCCTTGGCCTCCCAAAGTGCTGGGATTACA	12352	0.11323789703510513	No Hit
GTCTGAGGAAAATGAATCCACAGCTCTACCCCAGGTTCTAGCCCAGGTAT	11976	0.10979088851136812	No Hit
CAGCACATACACATTTTAGCATACCACAAATTCTTAACCCTTTCATATTC	11917	0.10925000153556895	No Hit
CTGATTGATGTTTAGCTCTAGACTAAGTTGCTTTCAAGTGATAATTGCCT	11006	0.10089833992619551	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGTCGA	4730	117.435394	4
TAGCGGC	4745	103.62464	8
CGCACGT	1960	99.77643	1
CTAGTCG	5655	98.1136	3
GCTAGCC	8735	95.89776	1
CGTGAGT	970	92.57992	145
CGATACT	1180	92.2988	7
CGGTTTA	1325	90.86394	1
CCGATGT	6890	90.049934	3
TGACCGA	6970	89.09428	9
AGTCGAA	6290	88.51247	5
CGTTGCG	2295	88.264915	5
CGATGTG	7060	87.97182	4
CGACGTA	1660	87.49242	5
TGTCGAC	4715	85.64175	9
TCGTGTT	6560	83.89838	4
GCTAGAC	1245	83.39921	2
GCCCGAT	7705	80.111855	1
GACGGGA	8270	79.01759	8
TAGCCCT	10780	78.53258	3