EGAF00005797252 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005797252
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	69437320
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC	137618	0.19819025273440852	No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG	123392	0.17770271087651424	No Hit
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGAT	112666	0.162255686135352	No Hit
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT	105500	0.15193558737578006	No Hit
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCG	100089	0.14414294791331234	No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA	86124	0.12403128461755147	No Hit
GTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGAC	78172	0.11257922972833628	No Hit
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGAT	76471	0.1101295384096045	No Hit
ATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGC	72771	0.10480099174334492	No Hit
CTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGACCACCAGG	71866	0.1034976580317328	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGCGCG	44775	42.515533	2
GTGGCGC	56650	33.93669	1
GGCGCGT	56840	33.44116	3
GCGCGTG	69420	27.476917	4
GCGACAT	33325	26.495106	7
TGCGACA	33625	25.848083	6
GGCGATC	12125	25.080822	1
CGCGTGC	77775	24.519415	5
GCGTGCC	86595	22.20175	6
GCTGCGA	40335	21.749222	4
CTGCGAC	41385	21.278025	5
CGTGCCT	98460	19.671787	7
CGACATC	48030	18.58089	8
GCGATCT	17245	17.241167	2
CGATCTG	18455	16.471163	3
GGCTGCG	54935	15.96894	3
CCTGTAG	116000	14.604621	9
GGTGGCG	35715	13.730063	1
GTGCCTG	148795	13.530924	8
TGCCTGT	153220	13.456109	9