FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75354784
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA129050.08.5434861
ATCGGAA146700.07.67628342
CGCCGTA54950.06.828666758-59
GCCGTAT68100.06.486528458-59
CGTATCA71650.06.131960460-61
CGGTGTA95000.05.59985638-39
GAGCGTC193250.05.5553419
GCGTCGT92300.05.42964610-11
AGAGCGT190950.05.34865578
CCGTATC90700.05.132069660-61
TCGGAAG249000.05.05679373
Produced by FastQC (version 0.11.5)