FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90550044
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA150150.07.766191
ATCGGAA170600.07.11174732
CTCGTAT86800.06.921842644-45
TCGTATG88250.06.781203744-45
TATGCCG90450.06.642520448-49
CGTATGC93650.06.54233646-47
Produced by FastQC (version 0.11.5)