FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90550044
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA154750.07.31428671
ATCGGAA176500.06.60094362
CGCCGTA72150.06.121586358-59
GCCGTAT84050.05.36788558-59
AATTCGT117550.05.11135136-37
CGTATCA85650.05.10126460-61
Produced by FastQC (version 0.11.5)