FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797275

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797275
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69837245
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA109000.014.0470971
ATCGGAA130500.012.0846722
TCGTATG80450.010.00718244-45
CTCGTAT82350.09.86280944-45
CGTATGC83900.09.82212946-47
TATGCCG84400.09.76394148-49
TCGGAAG226200.07.5175873
TCTCGTA119600.06.830739542-43
CGGAAGA291250.06.08303554
ATCTCGT155350.05.48812142-43
CGTCTGA152000.05.48405316-17
ATGCCGT162750.05.41366148-49
CGCTGAT174700.05.152332334-35
ACACGTC172850.05.097328712-13
Produced by FastQC (version 0.11.5)