FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005797277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70483529
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA134300.07.6449611
CGTATGC77550.06.951690746-47
TCGTATG74300.06.93619344-45
CTCGTAT76500.06.73672144-45
ATCGGAA153200.06.72911742
TATGCCG78000.06.698452548-49
TCCGATC71200.05.0033986
Produced by FastQC (version 0.11.5)