FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797282

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797282
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75505172
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA126550.08.0703281
ATCGGAA143350.07.58853772
CGCCGTA58650.07.57247558-59
CGTATCA70200.06.495813460-61
GCCGTAT66300.06.447973758-59
CCGTATC86950.05.326408460-61
AGAGCGT196350.05.2491468
CGGTGTA98800.05.240533438-39
GAGCGTC201600.05.04179059
Produced by FastQC (version 0.11.5)