FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797304

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797304
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132881015
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTGTCG302100.023.3231222
TGTCGGT324400.017.8244424
GTGTCGG432000.017.4326933
GTCGGTG534250.010.8229275
TCGGTGA484900.09.6198446
TCCGATC144650.08.94804134-35
CGGTGAC508900.07.8776147
CGATCTA89650.06.78176436-37
TTCCGAT188300.06.192714734-35
CCGATCT205150.05.938802236-37
GTGTGTC1030850.05.81762461
TCAGACG279150.05.623883720-21
TCGGTTA92350.05.19509176
AGTGTCG239350.05.1014772
Produced by FastQC (version 0.11.5)