FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82710546
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCGAC77600.09.94626734-35
GATCGGA152700.09.7577781
TCGTATG83000.09.18472844-45
CGTATGC84050.09.15478146-47
TATGCCG85050.09.13092548-49
ATCGGAA171300.09.017552
CTCGTAT86150.08.655930544-45
ATAGCGA94400.08.22648334-35
CATAGCG137350.06.22461232-33
GCGACAT123200.06.149197636-37
TCTCGTA127950.06.12508842-43
TCGGAAG284800.05.80734253
Produced by FastQC (version 0.11.5)