FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797308

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797308
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82710546
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA160350.08.857231
ATCGGAA176550.07.9074432
AGAGCGT233500.05.9374138
GAGCGTC242700.05.8884389
CGGTGTA115350.05.803780638-39
GTCGCTA60500.05.57440661
AAGAGCG278550.05.4714897
TCGGAAG305300.05.36593443
GCGTCGT122200.05.22585410-11
CGCCGTA62800.05.103730758-59
Produced by FastQC (version 0.11.5)