FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79478685
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA119300.09.6426561
ATCGGAA140700.08.4398292
TCGTATG83400.07.28981744-45
CGTATGC88400.06.9579946-47
CTCGTAT88150.06.81617844-45
TCCGATC77300.06.7590926
TATGCCG91100.06.647449548-49
TCGGAAG242500.05.6606133
AATCTCG126250.05.04157340-41
TCTCGTA129800.05.031586642-43
TTCCGAT104150.05.01658965
Produced by FastQC (version 0.11.5)