FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75353715
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCAGCG243850.025.9301682
TCAGCGG318550.019.118123
AGCGGTG286200.017.5936075
CAGCGGT296950.016.9729394
GCGGTGA288600.014.6981066
TCCGATC101250.013.65096234-35
CGGTGAC322050.012.2713197
CGATCTA57900.011.27937836-37
GATCAGC465550.010.7273021
TTCCGAT122750.010.42803734-35
CCGATCT137000.09.72463536-37
ATAAGCG66800.09.6719152
TCAGACG173350.09.5624520-21
TAAGCGG75250.07.63859753
AACAGCG201600.07.56422662
GACGTGT189350.07.136538522-23
CTTCCGA229800.06.29379432-33
CAGACGT213450.06.09708220-21
ATTAGCG43750.06.080792
GGTGACT579650.05.5803078
Produced by FastQC (version 0.11.5)