FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797325

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797325
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80237570
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTACTC301800.014.7246031
TTACTCG77100.012.5688812
CGTCGTA61650.08.55252532-33
GATCGGA131650.07.25648641
TCGTATG81600.06.956011344-45
ATCGGAA154150.06.8411682
CTCGTAT84250.06.79359544-45
TATGCCG84000.06.64408748-49
ACGTCGT86150.06.53382532-33
CGTATGC86750.06.296584646-47
TACTCGA80900.06.28226473
TCCGATC78850.05.5419846
ATTACTA306500.05.02418661
Produced by FastQC (version 0.11.5)