FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80237570
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA136250.07.25154921
CGCCGTA58850.07.02208758-59
ATCGGAA155150.06.73566252
CGAGTAA80050.06.28980232-33
GCCGTAT74550.05.798119558-59
CGTATCA77300.05.622622560-61
GTCGAGT93050.05.359982530-31
TCGAGTA91350.05.3557632-33
Produced by FastQC (version 0.11.5)