FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73751784
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA126500.09.7346641
TAGCGAC64600.09.33859834-35
ATCGGAA148250.08.2040152
TCGTATG78150.08.174561544-45
ATAGCGA78650.07.7609534-35
TATGCCG83450.07.569876748-49
CTCGTAT83100.07.34468744-45
CGTATGC86750.07.090310646-47
GCGACAT104000.06.029084736-37
CATAGCG118950.05.590668732-33
TCTCGTA124500.05.188546742-43
TCCGATC73850.05.0810476
TCGGAAG254300.05.0441673
Produced by FastQC (version 0.11.5)