FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005797348

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005797348
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73751784
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA133450.07.65546231
ATCGGAA153750.07.20013242
CGCCGTA57450.06.986285758-59
GCCGTAT65750.06.393330658-59
CGTATCA72950.05.79485360-61
AGAGCGT200800.05.65403848
CGGTGTA95750.05.60568438-39
GCGTCGT97350.05.148007410-11
CCGTATC87300.05.14156560-61
GAGCGTC214000.05.08326869
Produced by FastQC (version 0.11.5)